Sr Software Engineer - Bioinformatics - Austin, TX

POSITION TITLE: Sr Software Engineer

LOCATION: Preferably Austin, TX but open to remote, USA

PRIMARY RESPONSIBILITIES:

• Be part of a software engineering organization (this is not an R&D position), responsible for designing and implementing bioinformatics and full-stack code for tertiary analysis (SOP automation, technical review, variant curation and case review systems)
• Design and implement Python, Java (Spring), React and Angular software components.
• Engage with cross-functional teams such as Product Management, R&D, software architects, and senior leadership, aiming to improve existing processes and systems used for tertiary analysis.
• Analyze and improve existing front-end applications and propose solutions based on technical (software) experience and bioinformatics knowledge.
• Provide transparency and working progress on deliverables.

QUALIFICATIONS:

• 5+ years of experience with bioinformatics or software development for Health Care, focusing on clinical sample processing, variant curation and interpretation, annotations and diagnostic report generation.
• 3+ years of experience in Python development. Java and SpringBoot are a plus.
• Preferably a full-stack engineer with React and Angular experience or knowledge.
• Excellent communication skills.
• Able to write and use SQL queries effectively.
• Experience in working with an agile software development team using test-driven development and unit testing framework.
• Good understanding of browser rendering behavior and performance.
• Knowledge in REST API design concepts and JSON.

KNOWLEDGE, SKILLS, AND ABILITIES:

• Bioinformatics degree (MS or PhD)
• Degree or experience in Computing Science, Engineering or Molecular Biology (proven software development experience is required for molecular biologists)
• Experienced with WDL pipelines, AWS Omics or other genomics platform providers.
• Experience with public domain data sources, e.g. Clinvar, gnomAD preferred.
• Excellent organizational and time management skills.
• Good communication skills in group-chat and over telephone.
• Demonstrated teamwork skills with a solid analytical background.